Parallel computing in cloud computing

  1. Scaling and Accelerating on Clusters and in the Cloud
  2. What Is Accelerated Computing?
  3. MATLAB Parallel Server
  4. Power and performance management for parallel computations in clouds and data centers
  5. Energies
  6. What is HPC? Introduction to high
  7. High performance Computing
  8. Parallel computing in bioinformatics: a view from high


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Scaling and Accelerating on Clusters and in the Cloud

You can prototype and debug applications on the desktop with Through MATLAB ® and Parallel Computing Toolbox, users in your organization can submit jobs to computational resources configured with MATLAB Parallel Server without being concerned about differences in operating systems, environments, and schedulers. MATLAB Parallel Server integrates MATLAB and Simulink ® with existing scheduler environments at the application layer. “Our processing times went from 24 hours to 3 when we started running on the Azure cloud with MATLAB Parallel Server … Because the job scheduler is integrated into MATLAB, it’s easy to take advantage of parallel computing just by opening a pool and using parfor loops.” James Mann, Aberdeen Asset Management MATLAB Parallel Server Licensing MATLAB Parallel Server is licensed separately from MATLAB. It is licensed based on the number of MATLAB computational engines (workers) running simultaneously. For each MATLAB computational engine launched by the scheduler, a worker is checked out from the license. License size is determined by the number of workers you need to run simultaneously. The licensing model includes features to support unlimited scaling. End users are automatically licensed on the cluster for the MathWorks ® products they use on the desktop. The cluster requires only a MATLAB Parallel Server license. MATLAB Parallel Server can be used with a To assess your license needs, select one of the options below: Cluster Environment Option Effort R...

What Is Accelerated Computing?

Accelerated computing is humming in the background, making life better even on a quiet night at home. It prevents credit card fraud when you buy a movie to stream. It recommends a dinner you might like and arranges a fast delivery. Maybe it even helped the movie’s director win an Oscar for stunning visuals. So, What Is Accelerated Computing? Accelerated computing is the use of specialized hardware to dramatically speed up work, often with parallel processing that bundles frequently occurring tasks. It offloads demanding work that can bog down CPUs, processors that typically execute tasks in serial fashion. Born in the PC, accelerated computing came of age in supercomputers. It lives today in your smartphone and every cloud service. And now companies of every stripe are adopting it to transform their businesses with data. Accelerated computers blend CPUs and other kinds of processors together as equals in an architecture sometimes called heterogeneous computing. Accelerated Computers: A Look Under the Hood GPUs are the most widely used accelerators. An accelerated computer offers lower overall costs and higher performance and energy efficiency than a CPU-only system. Both commercial and technical systems today embrace accelerated computing to handle jobs such as How PCs Made Accelerated Computing Popular Specialized hardware called co-processors have long appeared in computers to accelerate the work of a host CPU. They first gained prominence around 1980 with floating-point...

MATLAB Parallel Server

MATLAB Parallel Server™ lets you scale MATLAB ® programs and Simulink ® simulations to clusters and clouds. You can prototype your programs and simulations on the desktop and then run them on clusters and clouds without recoding. MATLAB Parallel Server supports batch jobs, interactive parallel computations, and distributed computations with large matrices. All cluster-side licensing is handled by MATLAB Parallel Server. Your desktop license profile is dynamically enabled on the cluster, so you do not need to supply MATLAB licenses for the cluster. The licensing model includes features to support unlimited scaling. MATLAB Parallel Server runs your programs and simulations as scheduled applications on your cluster. You can use the MATLAB optimized scheduler provided with MATLAB Parallel Server or your own scheduler. A plugin framework enables direct communication with popular cluster scheduler submission clients. Prior to R2019a, MATLAB Parallel Server was called MATLAB Distributed Computing Server. Automate Management of Multiple Simulink Simulations Easily set up multiple runs and parameter sweeps, manage model dependencies and build folders, and transfer base workspace variables to cluster processes. Use the Simulation Manager user interface to visualize and manage multiple runs of Simulink models on a cluster.

Power and performance management for parallel computations in clouds and data centers

• • Address task scheduling in a data center as combinatorial optimization problems. • • Use level-by-level scheduling algorithms to deal with precedence constraints. • • Use a simple system partitioning and processor allocation scheme. • • Use two heuristic algorithms for scheduling independent tasks in the same level. • • Adopt a two-level energy/time/power allocation scheme. We address scheduling independent and precedence constrained parallel tasks on multiple homogeneous processors in a data center with dynamically variable voltage and speed as combinatorial optimization problems. We consider the problem of minimizing schedule length with energy consumption constraint and the problem of minimizing energy consumption with schedule length constraint on multiple processors. Our approach is to use level-by-level scheduling algorithms to deal with precedence constraints. We use a simple system partitioning and processor allocation scheme, which always schedules as many parallel tasks as possible for simultaneous execution. We use two heuristic algorithms for scheduling independent parallel tasks in the same level, i.e., SIMPLE and GREEDY. We adopt a two-level energy/time/power allocation scheme, namely, optimal energy/time allocation among levels of tasks and equal power supply to tasks in the same level. Our approach results in significant performance improvement compared with previous algorithms in scheduling independent and precedence constrained parallel tasks. • Previ...

Energies

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What is HPC? Introduction to high

HPC is technology that uses clusters of powerful processors, working in parallel, to process massive multi-dimensional datasets (big data) and solve complex problems at extremely high speeds. HPC systems typically perform at speeds more than one million times faster than the fastest commodity desktop, laptop or server systems. For decades the HPC system paradigm was the supercomputer, a purpose-built computer that embodies millions of processors or processor cores. Supercomputers are still with us; at this writing, the fastest supercomputer is the US-based exaflops, or quintillion floating point operations per second (flops). But today, more and more organizations are running HPC solutions on clusters of high-speed computers servers, hosted on premises or in the cloud. HPC workloads uncover important new insights that advance human knowledge and create significant competitive advantage. For example, HPC is used to sequence DNA, automate stock trading, and run A standard computing system solves problems primarily using serial computing—it divides the workload into a sequence of tasks, and then executes the tasks one after the other on the same processor. In contrast, HPC leverages • Massively parallel computing. Parallel computing runs multiple tasks simultaneously on multiple computer servers or processors. Massively parallel computing is parallel computing using tens of thousands to millions of processors or processor cores. • Computer clusters (also called HPC clusters)....

High performance Computing

It is the use of parallel processing for running advanced application programs efficiently, relatives, and quickly. The term applies especially is a system that function above a teraflop (10 12) (floating opm per second). The term High-performance computing is occasionally used as a synonym for supercomputing. Although technically a supercomputer is a system that performs at or near currently highest operational rate for computers. Some supercomputers work at more than a petaflop (10 12) floating points opm per second. The most common HPC system all scientific engineers & academic institutions. Some Government agencies particularly military are also relying on APC for complex applications. High-performance Computers: High Performance Computing (HPC) generally refers to the practice of combining computing power to deliver far greater performance than a typical desktop or workstation, in order to solve complex problems in science, engineering, and business. Processors, memory, disks, and OS are elements of high-performance computers of interest to small & medium size businesses today are really clusters of computers. Each individual computer in a commonly configured small cluster has between one and four processors and today ‘s processors typically are from 2 to 4 crores, HPC people often referred to individual computers in a cluster as nodes. A cluster of interest to a small business could have as few as 4 nodes on 16 crores. Common cluster size in many businesses is betwee...

Parallel computing in bioinformatics: a view from high

Bioinformatics allows and encourages the application of many different parallel computing approaches. This special issue brings together high-quality state-of-the-art contributions about parallel computing in bioinformatics, from different points of view or perspectives, that is, from high-performance, heterogeneous, and cloud computing. The special issue collects considerably extended and improved versions of the best papers, accepted and presented in PBio 2018 (6th International Workshop on Parallelism in Bioinformatics, and part of EuroMPI 2018). The domains and topics covered in these five papers are timely and important, and the authors have done an excellent job of presenting the material. • PBio: 6th International Workshop on Parallelism in Bioinformatics (2018). • Vitali E, Gadioli D, Palermo G, Beccari A, Cavazzoni C, Silvano C (2019) Exploiting OpenMP and OpenACC to accelerate a geometric approach to molecular docking in heterogeneous HPC nodes. J Supercomput. • Escobar JJ, Ortega J, Díaz AF, González J, Damas M (2019) Time-energy analysis of multi-level parallelism in heterogeneous clusters: the case of EEG classification in BCI tasks. J Supercomput. • Daberdaku S (2019) Accelerating the computation of triangulated molecular surfaces with OpenMP. J Supercomput. • González P, Argüeso-Alejandro P, Penas DR, Pardo XC, Saez-Rodriguez J, Banga JR, Doallo R (2019) Hybrid parallel multimethod hyperheuristic for mixed-integer dynamic optimization problems in computation...